Pipeline Store

Curated bioinformatics pipelines

Install, configure, and run nf-core workflows directly from SeqDesk.

Pipeline Store

Available Pipelines

Run curated nf-core workflows directly from SeqDesk.

v3.0.0Metagenomics

MAG Pipeline

nf-core/mag

Metagenome assembly, binning, and QC in one workflow.

v0.1.0Metagenomics

MetaxPath

MetaxPath (private)

Pathogen and resistance profiling workflow available with a private license package.

Private license required